• DocumentCode
    3512468
  • Title

    Quantitative biological studies enabled by robust cell tracking

  • Author

    Padfield, Dirk ; Rittscher, Jens ; Roysam, Badrinath

  • Author_Institution
    GE Global Res., Niskayuna, NY, USA
  • fYear
    2011
  • fDate
    March 30 2011-April 2 2011
  • Firstpage
    1929
  • Lastpage
    1934
  • Abstract
    A growing number of screening applications require the automated monitoring of cell populations enabled by cell segmentation and tracking algorithms in a high-throughput, high-content environment. Building upon the tracks generated by such algorithms, we derive biologically relevant features and demonstrate a range of biological studies made possible by such quantitative measures. In the first, we introduce a combination of quantitative features that characterize cell apoptosis and arrest. In the second, we automatically measure the effect of motility-promoting serums. In the third, we show that proper dosage levels can be automatically determined for studying protein translocations. These results provide large-scale quantitative validation of biological experiments and demonstrate that our framework provides a valuable tool for high-throughout biological studies.
  • Keywords
    biological techniques; biology computing; cell motility; feature extraction; image segmentation; molecular biophysics; proteins; automated monitoring; cell apoptosis; cell arrest; cell segmentation; motility-promoting serums; protein translocations; quantitative biological studies; robust cell tracking; screening applications; Bars; Feature extraction; Image segmentation; Particle measurements; Proteins; Tracking; Cell segmentation; cell trackingfeature analysis; quantitative biological studies;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Biomedical Imaging: From Nano to Macro, 2011 IEEE International Symposium on
  • Conference_Location
    Chicago, IL
  • ISSN
    1945-7928
  • Print_ISBN
    978-1-4244-4127-3
  • Electronic_ISBN
    1945-7928
  • Type

    conf

  • DOI
    10.1109/ISBI.2011.5872787
  • Filename
    5872787