Title :
A new sensitivity measure for probabilistic Boolean networks based on steady-state distributions
Author :
Qian, Xiaoning ; Dougherty, Edward R.
Abstract :
Probabilistic Boolean networks model biological processes with the network dynamics. This paper studies the network sensitivity with respect to perturbations to networks, including regulatory rules and the involved parameters, in the long run. We define the network sensitivity based on the steady-state distributions of probabilistic Boolean networks as their underlying model is a finite Markov chain. The steady-state distribution reflects the long-run behavior of the network and the change of steady-state distribution caused by possible perturbations is the key measure for intervention.
Keywords :
Markov processes; biology computing; physiological models; finite Markov chain; network dynamics; probabilistic Boolean networks; sensitivity measure; steady-state distributions; Biological processes; Biological system modeling; Biology computing; Chaos; Computer networks; Electric variables measurement; Guidelines; Lead; Steady-state; Uncertainty;
Conference_Titel :
Bioinformatics and Biomeidcine Workshops, 2008. BIBMW 2008. IEEE International Conference on
Conference_Location :
Philadelphia, PA
Print_ISBN :
978-1-4244-2890-8
DOI :
10.1109/BIBMW.2008.4686227