• DocumentCode
    3684841
  • Title

    Quantifying spatiotemporal complexity of cardiac dynamics using ordinal patterns

  • Author

    Alexander Schlemmer;Sebastian Berg;T. K. Shajahan;Stefan Luther;Ulrich Parlitz

  • Author_Institution
    Max Planck Institute for Dynamics and Self-Organization, Am Faß
  • fYear
    2015
  • Firstpage
    4049
  • Lastpage
    4052
  • Abstract
    Analyzing the dynamics of complex excitation wave patterns in cardiac tissue plays a key role for understanding the origin of life-threatening arrhythmias and for devising novel approaches to control them. The quantification of spatiotemporal complexity, however, remains a challenging task. This holds in particular for the analysis of data from fluorescence imaging (optical mapping), which allows for the measurement of membrane potential and intracellular calcium at high spatial and temporal resolution. Hitherto methods, like dominant frequency maps and the analysis of phase singularities, address important aspects of cardiac dynamics, but they consider very specific properties of excitable media, only. This article focuses on the benchmark of spatial complexity measures over time in the context of cardiac cell cultures. Standard Shannon Entropy and Spatial Permutation Entropy, an adaption of [1], have been implemented and applied to optical mapping data from embryonic chicken cell culture experiments. We introduce spatial separation of samples when generating ordinal patterns and show its importance for Spatial Permutation Entropy. Results suggest that Spatial Permutation Entropies provide a robust and interpretable measure for detecting qualitative changes in the dynamics of this excitable medium.
  • Keywords
    "Entropy","Complexity theory","Time series analysis","Optical imaging","Wavelet transforms","Electrocardiography","Calcium"
  • Publisher
    ieee
  • Conference_Titel
    Engineering in Medicine and Biology Society (EMBC), 2015 37th Annual International Conference of the IEEE
  • ISSN
    1094-687X
  • Electronic_ISBN
    1558-4615
  • Type

    conf

  • DOI
    10.1109/EMBC.2015.7319283
  • Filename
    7319283