DocumentCode :
447575
Title :
A scale-space filter approach to clustering dose-response curves of novel drug compounds
Author :
Dalai, S.S. ; Balaban, David J.
Author_Institution :
Syst. Informatics Group, Amgen, Inc., Thousand Oaks, CA, USA
Volume :
3
fYear :
2005
fDate :
10-12 Oct. 2005
Firstpage :
2844
Abstract :
Automated dose-response curve classification methods need to be developed to keep up with the vast amount of data emanating from high throughput screening assays. We have devised a methodology based on scale-space filtering that allows tracking of salient features of dose-response curves at different scales. A complete and unbiased representation of dose-response data at various scale levels enables us to subsequently employ metrics that robustly classify the different functional categories of drug compounds that may exist in a novel screening assay. This powerful tool is intuitive and yet rigorous in that it distinguishes "important" characteristics of "different" curves. The method is non-heuristic, eliminates subjectivity, and is general enough to be readily employed in a wide variety of applications.
Keywords :
curve fitting; drugs; filtering theory; pattern classification; pharmaceutical industry; automated dose-response curve classification method; novel drug compounds; scale-space filter approach; screening assay; Drugs; Filtering; Filters; High temperature superconductors; Informatics; Matrix converters; Performance analysis; Robustness; Smoothing methods; Throughput; Automatic classification; Clustering; Functional high throughput screening; Gaussian smoothing; Multiscale representation; Scale-space filtering;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Systems, Man and Cybernetics, 2005 IEEE International Conference on
Print_ISBN :
0-7803-9298-1
Type :
conf
DOI :
10.1109/ICSMC.2005.1571581
Filename :
1571581
Link To Document :
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