DocumentCode
511069
Title
GREE-VS: A Grid-based Remote Execution Environment System for Virtual Screening
Author
Piao, Minghe ; Sang Boem Lim ; Jong Hyun Lee
Author_Institution
Dept. of Adv. Technol. Fusion, Konkuk Univ., Seoul, South Korea
Volume
1
fYear
2009
fDate
28-30 Dec. 2009
Firstpage
615
Lastpage
619
Abstract
There are many ongoing research projects in the fusion technology field, including biological technology, environment technology, and information technology. Several studies have been conducted on optimized short jobs for virtual screening. It would be highly beneficial to investigate high-throughput computing for short jobs in virtual screening. If this technique proved functional on cluster or grid computing, it would have the potential to reduce cost, time, and work force. In this paper, we propose that the remote execution environment system will optimize grid-based short jobs and identify the availability of new drug candidates that will save time and money in the pharmaceutical and biosciences sectors. This paper discusses high-throughput computing in multi-level scheduling for virtual screening and presents research on how to integrate Falkon into a grid-based remote execution environment for virtual screening. Taking information about parameters for virtual screening, we analyze experiments and submit tasks. The resulting files will be provided on the portal system in support of the results. We completed the design of the system support for the grid environments on the first release. The development of the non-grid and grid support versions is under way.
Keywords
grid computing; portals; scheduling; virtual reality; GREE-VS; biological technology; biosciences sectors; environment technology; grid computing; grid-based remote execution environment system; information technology; multilevel scheduling; portal system; virtual screening; Biology computing; Chemical compounds; Costs; Databases; Drugs; Grid computing; Information technology; Pharmaceutical technology; Processor scheduling; Supercomputers; Falkon; grid-based; high-throughput computing; virtual screening;
fLanguage
English
Publisher
ieee
Conference_Titel
Computer and Electrical Engineering, 2009. ICCEE '09. Second International Conference on
Conference_Location
Dubai
Print_ISBN
978-1-4244-5365-8
Electronic_ISBN
978-0-7695-3925-6
Type
conf
DOI
10.1109/ICCEE.2009.50
Filename
5380170
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