Title :
Notice of Retraction
Sequence analysis of manganese peroxidase in Phanerochaete sordida
Author :
Li he ; Liu Jun ang ; You jia ; Mei jie ; Pang Huaping
Author_Institution :
Biotechnol. Core Facilities, Central South Univ. of Forestry & Technol., Changsha, China
Abstract :
Notice of Retraction
After careful and considered review of the content of this paper by a duly constituted expert committee, this paper has been found to be in violation of IEEE´s Publication Principles.
We hereby retract the content of this paper. Reasonable effort should be made to remove all past references to this paper.
The presenting author of this paper has the option to appeal this decision by contacting TPII@ieee.org.
Manganese peroxidase(MnP) was the most common lignin-modifying peroxidase produced by almost all wood-colonizing basidiomycetes causing white-rot and various soil-colonizing litter-decomposing fungi. MnP could be applied in biotechnological applications, removing of hazardous wastes or in certain organic syntheses. In the present study, some characters of the amino acid sequence of P.sordida manganese peroxidase were predicted and analyzed with the tools of bioinformatics. These results showed that the protein was composed of 19 kinds of amino acid; the theoretical pI of manganese peroxidase was 4.46 and the theoretical molecular weight of manganese peroxidase was 39559.4 Da; total number of atoms was 5485; the extinction coefficient was 6125(280 nm).The N-terminal of the sequence considered was M (Met) and the estimated half-life was 30 hours. The instability index (II) was computed to be 42.17; Aliphatic index was 79.03. There were 8 glycosylation sites, a signal peptide. There were 18 glycosylation sites in P.sordida manganese peroxidase. It was a hydrolyze protein.
Keywords :
bioinformatics; biotechnology; enzymes; extinction coefficients; hazardous materials; manganese compounds; microorganisms; molecular weight; organic compounds; N-terminal; Phanerochaete sordida; aliphatic index; amino acid sequence; atoms; bioinformatics; biotechnological applications; extinction coefficient; glycosylation sites; half-life; hazardous wastes; hydrolyze protein; instability index; lignin-modifying peroxidase; manganese peroxidase; organic syntheses; sequence analysis; signal peptide; soil-colonizing litter-decomposing fungi; theoretical molecular weight; white-rot; wood-colonizing basidiomycetes; Bioinformatics; Manganese; Sequences; World Wide Web; P.sordida; lignin degradation; manganese peroxidase;
Conference_Titel :
Environmental Science and Information Application Technology (ESIAT), 2010 International Conference on
Conference_Location :
Wuhan
Print_ISBN :
978-1-4244-7387-8
DOI :
10.1109/ESIAT.2010.5568485