• DocumentCode
    574659
  • Title

    Analysis of a negative feedback biochemical oscillator

  • Author

    Franco, Elisa ; Blanchini, Franco

  • Author_Institution
    Dept. of Mech. Eng., Univ. of California at Riverside, Riverside, CA, USA
  • fYear
    2012
  • fDate
    27-29 June 2012
  • Firstpage
    3445
  • Lastpage
    3450
  • Abstract
    In this paper we describe and analyze a biochemical network that admits oscillatory solutions. Such network simplifies and generalizes the chemical reaction structure of a recently published synthetic in vitro oscillator [1]. We analytically demonstrate that this system admits oscillatory solutions, using simple linearization techniques. Numerical simulations suggest that the oscillatory domain of the system is a closed region, which can be expanded when additional reactions are present. We are devising a structural analysis of the system to derive explicit design criteria to achieve oscillations.
  • Keywords
    biochemistry; chemical reactions; circadian rhythms; linearisation techniques; numerical analysis; oscillators; additional reactions; biochemical network; chemical reaction structure; explicit design criteria; negative feedback biochemical oscillator analysis; numerical simulation; oscillatory domain; oscillatory solutions; simple linearization techniques; structural analysis; synthetic in vitro oscillator; Biological system modeling; Jacobian matrices; Mathematical model; Oscillators; Polynomials; Trajectory;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    American Control Conference (ACC), 2012
  • Conference_Location
    Montreal, QC
  • ISSN
    0743-1619
  • Print_ISBN
    978-1-4577-1095-7
  • Electronic_ISBN
    0743-1619
  • Type

    conf

  • DOI
    10.1109/ACC.2012.6315245
  • Filename
    6315245