• DocumentCode
    599172
  • Title

    DNA sequence analysis by ORF FINDER & GENOMATIX tool: Bioinformatics analysis of some tree species of Leguminosae family

  • Author

    Patel, Surabhi ; Panchal, H. ; Anjaria, K.

  • Author_Institution
    G.H. Patel Post Grad. Dept. of Comput. Sci. & Technol., Sardar Patel Univ., Vallabh Vidyanagar, India
  • fYear
    2012
  • fDate
    4-7 Oct. 2012
  • Firstpage
    922
  • Lastpage
    926
  • Abstract
    Bioinformatics is rapidly growing field of applied science, here we have done DNA sequence analyses of few legume tree species by bioinformatics tools. In this paper bioinformatics data of some leguminous trees have been explored and brought to one platform. Various analytical bioinformatics tools were used to generate the information for particular species or group of species. DNA sequence analyses have been done by ORF FINDER & GENOMATIX. The results were discussed in context with all available data generated through above methods for leguminous trees. We have done analysis of 23 legume species of Leguminosae family, and it is further classified in three subfamily, 1. Fabaceae (Papilionaceae) 2. Caesalpiniaceae 3. Mimosaeae and made a database which contains all legume species results, but here we have taken only two legume species in two tools to demonstrate our work. We have used DNA sequence from EMBL database.
  • Keywords
    bioinformatics; data analysis; database management systems; pattern classification; Caesalpiniaceae legume subfamily; DNA sequence analysis; EMBL database; Fabaceae legume subfamily; GENOMATIX tool; Leguminosae family; Mimosaeae legume subfamily; ORF FINDER tool; bioinformatics analysis; bioinformatics tool; data classification; Bioinformatics; DNA; Databases; Educational institutions; Genomics; Proteins; Vegetation; EMBL- The European Molecular Biology Laboratory;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    Bioinformatics and Biomedicine Workshops (BIBMW), 2012 IEEE International Conference on
  • Conference_Location
    Philadelphia, PA
  • Print_ISBN
    978-1-4673-2746-6
  • Electronic_ISBN
    978-1-4673-2744-2
  • Type

    conf

  • DOI
    10.1109/BIBMW.2012.6470265
  • Filename
    6470265