DocumentCode :
610381
Title :
Top-k string similarity search with edit-distance constraints
Author :
Dong Deng ; Guoliang Li ; Jianhua Feng ; Wen-Syan Li
Author_Institution :
Dept. of Comput. Sci., Tsinghua Univ., Beijing, China
fYear :
2013
fDate :
8-12 April 2013
Firstpage :
925
Lastpage :
936
Abstract :
String similarity search is a fundamental operation in many areas, such as data cleaning, information retrieval, and bioinformatics. In this paper we study the problem of top-k string similarity search with edit-distance constraints, which, given a collection of strings and a query string, returns the top-k strings with the smallest edit distances to the query string. Existing methods usually try different edit-distance thresholds and select an appropriate threshold to find top-k answers. However it is rather expensive to select an appropriate threshold. To address this problem, we propose a progressive framework by improving the traditional dynamic-programming algorithm to compute edit distance. We prune unnecessary entries in the dynamic-programming matrix and only compute those pivotal entries. We extend our techniques to support top-k similarity search. We develop a range-based method by grouping the pivotal entries to avoid duplicated computations. Experimental results show that our method achieves high performance, and significantly outperforms state-of-the-art approaches on real-world datasets.
Keywords :
dynamic programming; query processing; string matching; bioinformatics; data cleaning; dynamic programming algorithm; dynamic programming matrix; edit-distance constraint; edit-distance threshold; information retrieval; query string; range-based method; top-k answer; top-k string similarity search; Bioinformatics; Cleaning; Indexes; Search problems; Time complexity;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Data Engineering (ICDE), 2013 IEEE 29th International Conference on
Conference_Location :
Brisbane, QLD
ISSN :
1063-6382
Print_ISBN :
978-1-4673-4909-3
Electronic_ISBN :
1063-6382
Type :
conf
DOI :
10.1109/ICDE.2013.6544886
Filename :
6544886
Link To Document :
بازگشت