DocumentCode
630634
Title
Biomolecular resource utilization in elementary cell-free gene circuits
Author
Siegal-Gaskins, Dan ; Noireaux, Vincent ; Murray, Richard M.
Author_Institution
Dept. of Bioeng., California Inst. of Technol., Pasadena, CA, USA
fYear
2013
fDate
17-19 June 2013
Firstpage
1531
Lastpage
1536
Abstract
We present a detailed dynamical model of the behavior of transcription-translation circuits in vitro that makes explicit the roles played by essential molecular resources. A set of simple two-gene test circuits operating in a cell-free biochemical `breadboard´ validate this model and highlight the consequences of limited resource availability. In particular, we are able to confirm the existence of biomolecular `crosstalk´ and isolate its individual sources. The implications of crosstalk for biomolecular circuit design and function are discussed.
Keywords
biochemistry; biomolecular electronics; cellular biophysics; genetics; molecular biophysics; network synthesis; biomolecular circuit design; biomolecular circuit function; biomolecular crosstalk; biomolecular resource utilization; cell-free biochemical breadboard; dynamical model; elementary cell-free gene circuits; limited resource availability; molecular resources; simple two-gene test circuits; transcription-translation circuits; Biological system modeling; Crosstalk; In vitro; Integrated circuit modeling; Mathematical model; Proteins; RNA;
fLanguage
English
Publisher
ieee
Conference_Titel
American Control Conference (ACC), 2013
Conference_Location
Washington, DC
ISSN
0743-1619
Print_ISBN
978-1-4799-0177-7
Type
conf
DOI
10.1109/ACC.2013.6580053
Filename
6580053
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