• DocumentCode
    630634
  • Title

    Biomolecular resource utilization in elementary cell-free gene circuits

  • Author

    Siegal-Gaskins, Dan ; Noireaux, Vincent ; Murray, Richard M.

  • Author_Institution
    Dept. of Bioeng., California Inst. of Technol., Pasadena, CA, USA
  • fYear
    2013
  • fDate
    17-19 June 2013
  • Firstpage
    1531
  • Lastpage
    1536
  • Abstract
    We present a detailed dynamical model of the behavior of transcription-translation circuits in vitro that makes explicit the roles played by essential molecular resources. A set of simple two-gene test circuits operating in a cell-free biochemical `breadboard´ validate this model and highlight the consequences of limited resource availability. In particular, we are able to confirm the existence of biomolecular `crosstalk´ and isolate its individual sources. The implications of crosstalk for biomolecular circuit design and function are discussed.
  • Keywords
    biochemistry; biomolecular electronics; cellular biophysics; genetics; molecular biophysics; network synthesis; biomolecular circuit design; biomolecular circuit function; biomolecular crosstalk; biomolecular resource utilization; cell-free biochemical breadboard; dynamical model; elementary cell-free gene circuits; limited resource availability; molecular resources; simple two-gene test circuits; transcription-translation circuits; Biological system modeling; Crosstalk; In vitro; Integrated circuit modeling; Mathematical model; Proteins; RNA;
  • fLanguage
    English
  • Publisher
    ieee
  • Conference_Titel
    American Control Conference (ACC), 2013
  • Conference_Location
    Washington, DC
  • ISSN
    0743-1619
  • Print_ISBN
    978-1-4799-0177-7
  • Type

    conf

  • DOI
    10.1109/ACC.2013.6580053
  • Filename
    6580053