DocumentCode :
646181
Title :
Model-order reduction of biochemical reaction networks
Author :
Rao, Smitha ; van der Schaft, Arjan ; van Eunen, Karen ; Bakker, Barbara M. ; Jayawardhana, Bayu
Author_Institution :
Center for Syst. Biol., Univ. of Groningen, Groningen, Netherlands
fYear :
2013
fDate :
17-19 July 2013
Firstpage :
4502
Lastpage :
4507
Abstract :
In this paper we propose a model-order reduction method for chemical reaction networks governed by general enzyme kinetics, including the mass-action and Michaelis-Menten kinetics. The model-order reduction method is based on the Kron reduction of the weighted Laplacian matrix which describes the graph structure of complexes in the chemical reaction network. We apply our method to a yeast glycolysis model, where the simulation result shows that the transient behaviour of a number of key metabolites of the reduced-order model is in good agreement with those of the full-order model.
Keywords :
biology; graph theory; matrix algebra; reduced order systems; Kron reduction; Michaelis-Menten kinetics; biochemical reaction networks; full-order model; general enzyme kinetics; key metabolites; model-order reduction method; weighted Laplacian matrix; yeast glycolysis model; Biochemistry; Biological system modeling; Chemicals; Kinetic theory; Mathematical model; Reduced order systems; Vectors;
fLanguage :
English
Publisher :
ieee
Conference_Titel :
Control Conference (ECC), 2013 European
Conference_Location :
Zurich
Type :
conf
Filename :
6669587
Link To Document :
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