• DocumentCode
    81141
  • Title

    A technique for determining the signs of sensitivities of steady states in chemical reaction networks

  • Author

    Sontag, Eduardo D.

  • Author_Institution
    Dept. of Math., Rutgers Univ., Piscataway, NJ, USA
  • Volume
    8
  • Issue
    6
  • fYear
    2014
  • fDate
    12 2014
  • Firstpage
    251
  • Lastpage
    267
  • Abstract
    This paper studies the direction of change of steady states to parameter perturbations in chemical reaction networks, and, in particular, to changes in conserved quantities. Theoretical considerations lead to the formulation of a computational procedure that provides a set of possible signs of such sensitivities. The procedure is purely algebraic and combinatorial, only using information on stoichiometry, and is independent of the values of kinetic constants. Three examples of important intracellular signal transduction models are worked out as an illustration. In these examples, the set of signs found is minimal, but there is no general guarantee that the set found will always be minimal in other examples. The paper also briefly discusses the relationship of the sign problem to the question of uniqueness of steady states in stoichiometry classes.
  • Keywords
    algebra; biochemistry; cellular biophysics; chemical reactions; combinatorial mathematics; stoichiometry; algebraic method; chemical reaction networks; combinatorial method; intracellular signal transduction models; parameter perturbations; steady states; stoichiometry;
  • fLanguage
    English
  • Journal_Title
    Systems Biology, IET
  • Publisher
    iet
  • ISSN
    1751-8849
  • Type

    jour

  • DOI
    10.1049/iet-syb.2014.0025
  • Filename
    6978109