Title :
Genetic Algorithms for Finite Mixture Model Based Voxel Classification in Neuroimaging
Author :
Tohka, J. ; Krestyannikov, E. ; Dinov, I.D. ; Graham, A.M. ; Shattuck, D.W. ; Ruotsalainen, U. ; Toga, A.W.
Author_Institution :
Dept. of Neurology, California Univ., Los Angeles, CA
fDate :
5/1/2007 12:00:00 AM
Abstract :
Finite mixture models (FMMs) are an indispensable tool for unsupervised classification in brain imaging. Fitting an FMM to the data leads to a complex optimization problem. This optimization problem is difficult to solve by standard local optimization methods, such as the expectation-maximization (EM) algorithm, if a principled initialization is not available. In this paper, we propose a new global optimization algorithm for the FMM parameter estimation problem, which is based on real coded genetic algorithms. Our specific contributions are two-fold: 1) we propose to use blended crossover in order to reduce the premature convergence problem to its minimum and 2) we introduce a completely new permutation operator specifically meant for the FMM parameter estimation. In addition to improving the optimization results, the permutation operator allows for imposing biologically meaningful constraints to the FMM parameter values. We also introduce a hybrid of the genetic algorithm and the EM algorithm for efficient solution of multidimensional FMM fitting problems. We compare our algorithm to the self-annealing EM-algorithm and a standard real coded genetic algorithm with the voxel classification tasks within the brain imaging. The algorithms are tested on synthetic data as well as real three-dimensional image data from human magnetic resonance imaging, positron emission tomography, and mouse brain MRI. The tissue classification results by our method are shown to be consistently more reliable and accurate than with the competing parameter estimation methods
Keywords :
biological tissues; biomedical MRI; brain; expectation-maximisation algorithm; genetic algorithms; image classification; medical image processing; positron emission tomography; brain imaging; finite mixture model; genetic algorithms; human magnetic resonance imaging; mouse brain MRI; neuroimaging; optimization; parameter estimation problem; positron emission tomography; real coded genetic algorithm; self-annealing EM-algorithm; tissue classification; unsupervised classification; voxel classification; Biological information theory; Brain modeling; Constraint optimization; Convergence; Genetic algorithms; Magnetic resonance imaging; Multidimensional systems; Neuroimaging; Optimization methods; Parameter estimation; Global optimization; image segmentation; magnetic resonance imaging (MRI); parameter estimation; positron emission tomography (PET); Algorithms; Animals; Artificial Intelligence; Brain; Computer Simulation; Finite Element Analysis; Humans; Image Enhancement; Image Interpretation, Computer-Assisted; Imaging, Three-Dimensional; Magnetic Resonance Imaging; Mice; Models, Genetic; Models, Neurological; Neuroanatomy; Pattern Recognition, Automated; Positron-Emission Tomography; Reproducibility of Results; Sensitivity and Specificity;
Journal_Title :
Medical Imaging, IEEE Transactions on
DOI :
10.1109/TMI.2007.895453