DocumentCode
826
Title
Intercellular Delay Regulates the Collective Period of Repressively Coupled Gene Regulatory Oscillator Networks
Author
Yongqiang Wang ; Hori, Yoichi ; Hara, Satoshi ; Doyle, Francis J.
Author_Institution
Dept. of Chem. Eng., Univ. of California, Santa Barbara, Santa Barbara, CA, USA
Volume
59
Issue
1
fYear
2014
fDate
Jan. 2014
Firstpage
211
Lastpage
216
Abstract
Most biological rhythms are generated by a population of cellular oscillators coupled through intercellular signaling. Recent experimental evidence shows that the collective period may differ significantly from the autonomous period in the presence of intercellular delays. The phenomenon has been investigated using delay-coupled phase oscillators, but the proposed phase model contains no direct biological mechanism, which may weaken the model´s reliability in unraveling biophysical principles. Based on a published gene regulatory oscillator model, we analyze the collective period of delay-coupled biological oscillators using the multivariable harmonic balance technique. We prove that, in contradiction to the common intuition that the collective period increases linearly with the coupling delay, the collective period turns out to be a periodic function of the intercellular delay. More surprisingly, the collective period may even decrease with the intercellular delay when the delay resides in certain regions. The collective period is given in a closed-form in terms of biochemical reaction constants and thus provides biological insights as well as guidance in synthetic-biological-oscillator design. Simulation results are given based on a segmentation clock model to confirm the theoretical predictions.
Keywords
biochemistry; cellular biophysics; circadian rhythms; genetics; oscillators; autonomous period; biochemical reaction constants; biological mechanism; biological rhythms; biophysical principles; cellular oscillators; collective period; coupling delay; delay-coupled biological oscillators; delay-coupled phase oscillators; gene regulatory oscillator model; intercellular delays; intercellular signaling; multivariable harmonic balance technique; periodic function; phase model; repressively coupled gene regulatory oscillator networks; segmentation clock model; synthetic-biological-oscillator design; Collective period; gene regulatory oscillators; intercellular delay; repressive coupling;
fLanguage
English
Journal_Title
Automatic Control, IEEE Transactions on
Publisher
ieee
ISSN
0018-9286
Type
jour
DOI
10.1109/TAC.2013.2270072
Filename
6544203
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