• DocumentCode
    826
  • Title

    Intercellular Delay Regulates the Collective Period of Repressively Coupled Gene Regulatory Oscillator Networks

  • Author

    Yongqiang Wang ; Hori, Yoichi ; Hara, Satoshi ; Doyle, Francis J.

  • Author_Institution
    Dept. of Chem. Eng., Univ. of California, Santa Barbara, Santa Barbara, CA, USA
  • Volume
    59
  • Issue
    1
  • fYear
    2014
  • fDate
    Jan. 2014
  • Firstpage
    211
  • Lastpage
    216
  • Abstract
    Most biological rhythms are generated by a population of cellular oscillators coupled through intercellular signaling. Recent experimental evidence shows that the collective period may differ significantly from the autonomous period in the presence of intercellular delays. The phenomenon has been investigated using delay-coupled phase oscillators, but the proposed phase model contains no direct biological mechanism, which may weaken the model´s reliability in unraveling biophysical principles. Based on a published gene regulatory oscillator model, we analyze the collective period of delay-coupled biological oscillators using the multivariable harmonic balance technique. We prove that, in contradiction to the common intuition that the collective period increases linearly with the coupling delay, the collective period turns out to be a periodic function of the intercellular delay. More surprisingly, the collective period may even decrease with the intercellular delay when the delay resides in certain regions. The collective period is given in a closed-form in terms of biochemical reaction constants and thus provides biological insights as well as guidance in synthetic-biological-oscillator design. Simulation results are given based on a segmentation clock model to confirm the theoretical predictions.
  • Keywords
    biochemistry; cellular biophysics; circadian rhythms; genetics; oscillators; autonomous period; biochemical reaction constants; biological mechanism; biological rhythms; biophysical principles; cellular oscillators; collective period; coupling delay; delay-coupled biological oscillators; delay-coupled phase oscillators; gene regulatory oscillator model; intercellular delays; intercellular signaling; multivariable harmonic balance technique; periodic function; phase model; repressively coupled gene regulatory oscillator networks; segmentation clock model; synthetic-biological-oscillator design; Collective period; gene regulatory oscillators; intercellular delay; repressive coupling;
  • fLanguage
    English
  • Journal_Title
    Automatic Control, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9286
  • Type

    jour

  • DOI
    10.1109/TAC.2013.2270072
  • Filename
    6544203