• DocumentCode
    845090
  • Title

    An automated approach for analyzing D-periods in collagen fibril images

  • Author

    Gkoumplias, V. ; Zervakis, M. ; Tzaphlidou, M.

  • Author_Institution
    Dept. of Electron. & Comput. Eng., Tech. Univ. of Crete, Greece
  • Volume
    52
  • Issue
    7
  • fYear
    2005
  • fDate
    7/1/2005 12:00:00 AM
  • Firstpage
    1345
  • Lastpage
    1347
  • Abstract
    This paper considers an approach for analyzing fibrillar collagen structures based on fundamental concepts of pattern recognition. It focuses on the quantitative comparison between collagen structural data (electron-optical data) and chemical data. Theoretical models in the form of sequence-generated histograms are used as reference for extracting and analyzing the structural unit in images from collagen fibrils. In this respect, collagen provides a valuable model system for studying the chemical basis of ultrastructure, as well as detecting the alterations in collagen fibril structure produced by a disorder. Application examples are presented and the results are compared with biochemical studies.
  • Keywords
    biochemistry; biomedical optical imaging; electron microscopy; medical image processing; molecular biophysics; molecular configurations; pattern recognition; physiological models; proteins; skin; D-period analysis; biochemistry; collagen fibril images; collagen structure; electron-optics; pattern recognition; sequence-generated histograms; Amino acids; Biomedical engineering; Biomedical imaging; Bone diseases; Chemicals; Electron microscopy; Histograms; Image analysis; Sequences; Skin; Collagen images; Pearson´s; collagen structure; electron optical data; fibrillar protein; sequence-generated histogram; Algorithms; Amino Acid Sequence; Animals; Collagen Type I; Collagen Type III; Fibrillar Collagens; Image Interpretation, Computer-Assisted; Liver; Models, Chemical; Models, Molecular; Molecular Sequence Data; Rabbits; Rats; Sequence Analysis, Protein; Skin;
  • fLanguage
    English
  • Journal_Title
    Biomedical Engineering, IEEE Transactions on
  • Publisher
    ieee
  • ISSN
    0018-9294
  • Type

    jour

  • DOI
    10.1109/TBME.2005.847529
  • Filename
    1440613